Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS3D02G196800

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Location

Chromosome 3D: 200,382,785-200,398,134 forward strand.

About this gene

This gene has 10 transcripts (splice variants) and 159 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS3D02G196800.10	4076	1182aa	TraesCS3D02G196800.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T1J1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS3D02G196800.7	4076	1182aa	TraesCS3D02G196800.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T0H7	-
-	TraesCS3D02G196800.1	4064	1178aa	TraesCS3D02G196800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341SYR4	-
-	TraesCS3D02G196800.8	4055	1175aa	TraesCS3D02G196800.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T9Q1	-
-	TraesCS3D02G196800.4	4052	1174aa	TraesCS3D02G196800.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T4Z5	-
-	TraesCS3D02G196800.3	4052	1174aa	TraesCS3D02G196800.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T9P6	-
-	TraesCS3D02G196800.9	3941	1137aa	TraesCS3D02G196800.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T500	-
-	TraesCS3D02G196800.6	3935	1135aa	TraesCS3D02G196800.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T1J7	-
-	TraesCS3D02G196800.2	3932	1134aa	TraesCS3D02G196800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341T0H2	-
-	TraesCS3D02G196800.5	3923	1131aa	TraesCS3D02G196800.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341SYR8	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data