Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS2B02G325600

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Description

Smg-4/UPF3 family protein [Source:Projected from Arabidopsis thaliana (AT1G33980) TAIR;Acc:AT1G33980]

Location

Chromosome 2B: 465,125,250-465,137,720 reverse strand.

About this gene

This gene has 10 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS2B02G325600.2	2591	512aa	TraesCS2B02G325600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5TUP6 A0A1D6RNR9 A0A2X0S6U5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS2B02G325600.4	3913	435aa	TraesCS2B02G325600.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5TUQ0	-
-	TraesCS2B02G325600.3	3889	427aa	TraesCS2B02G325600.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QPC2	-
-	TraesCS2B02G325600.1	2598	509aa	TraesCS2B02G325600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5BCA5	-
-	TraesCS2B02G325600.8	2595	508aa	TraesCS2B02G325600.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5TUQ1	-
-	TraesCS2B02G325600.9	2574	501aa	TraesCS2B02G325600.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5TUQ2	-
-	TraesCS2B02G325600.7	2571	500aa	TraesCS2B02G325600.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5TUP7	-
-	TraesCS2B02G325600.6	2571	500aa	TraesCS2B02G325600.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QQY2	-
-	TraesCS2B02G325600.10	2568	499aa	TraesCS2B02G325600.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5TUP8	-
-	TraesCS2B02G325600.5	1976	414aa	TraesCS2B02G325600.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QTU4	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data