Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Homoeologues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS2B02G289500

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Description

Protein TRANSPARENT TESTA 9 [Source:Projected from Arabidopsis thaliana (AT3G28430) UniProtKB/Swiss-Prot;Acc:Q8W4P9]

Location

Chromosome 2B: 400,347,942-400,365,630 forward strand.

About this gene

This gene has 8 transcripts (splice variants) and 158 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS2B02G289500.8	3387	898aa	TraesCS2B02G289500.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QSC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS2B02G289500.5	3351	886aa	TraesCS2B02G289500.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QQ69	-
-	TraesCS2B02G289500.7	3288	865aa	TraesCS2B02G289500.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QYR1	-
-	TraesCS2B02G289500.3	3240	849aa	TraesCS2B02G289500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QSB9	-
-	TraesCS2B02G289500.6	3225	844aa	TraesCS2B02G289500.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QMU9	-
-	TraesCS2B02G289500.4	3222	843aa	TraesCS2B02G289500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QPM2	-
-	TraesCS2B02G289500.2	2263	682aa	TraesCS2B02G289500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QYQ5	-
-	TraesCS2B02G289500.1	2140	641aa	TraesCS2B02G289500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A341QMU3	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data