Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400027904

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Description

Relative to APETALA2 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400027904]

Location

Chromosome 9: 6,664,957-6,668,182 reverse strand.

About this gene

This gene has 9 transcripts (splice variants), 110 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400071732	1891	457aa	PGSC0003DMT400071732	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP82	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400071727	2317	166aa	PGSC0003DMT400071727	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP77	-
-	PGSC0003DMT400071728	2219	166aa	PGSC0003DMT400071728	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP77	-
-	PGSC0003DMT400071729	2211	166aa	PGSC0003DMT400071729	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP77	-
-	PGSC0003DMT400071730	2211	166aa	PGSC0003DMT400071730	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP77	-
-	PGSC0003DMT400071726	2187	166aa	PGSC0003DMT400071726	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP77	-
-	PGSC0003DMT400071731	1846	442aa	PGSC0003DMT400071731	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP81	-
-	PGSC0003DMT400071733	1781	166aa	PGSC0003DMT400071733	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP77	-
-	PGSC0003DMT400071734	633	83aa	PGSC0003DMT400071734	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CP84	-

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Summary

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