Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c9_16780

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Location

Chromosome 9: 11,372,773-11,377,617 reverse strand.

About this gene

This gene has 10 transcripts (splice variants), 90 orthologues and 47 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c9_16780V3.9	3545	552aa	Pp3c9_16780V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3F7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c9_16780V3.4	3558	425aa	Pp3c9_16780V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4EHR8	-
-	Pp3c9_16780V3.3	3128	425aa	Pp3c9_16780V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4EHR8	-
-	Pp3c9_16780V3.2	3121	425aa	Pp3c9_16780V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4EHR8	-
-	Pp3c9_16780V3.8	3115	552aa	Pp3c9_16780V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3F7	-
-	Pp3c9_16780V3.7	3108	552aa	Pp3c9_16780V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3F7	-
-	Pp3c9_16780V3.6	2937	552aa	Pp3c9_16780V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3F7	-
-	Pp3c9_16780V3.5	2930	552aa	Pp3c9_16780V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3F7	-
-	Pp3c9_16780V3.1	2852	552aa	Pp3c9_16780V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3F7	-
-	Pp3c9_16780V3.10	2260	425aa	Pp3c9_16780V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4EHR8	-

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Summary

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