Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c27_2420

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Location

Chromosome 27: 1,345,876-1,351,353 reverse strand.

About this gene

This gene has 12 transcripts (splice variants), 382 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c27_2420V3.5	3821	285aa	Pp3c27_2420V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c27_2420V3.8	3716	250aa	Pp3c27_2420V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D5X9	-
-	Pp3c27_2420V3.4	3052	285aa	Pp3c27_2420V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.3	3006	285aa	Pp3c27_2420V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.7	2901	250aa	Pp3c27_2420V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D5X9	-
-	Pp3c27_2420V3.11	2821	285aa	Pp3c27_2420V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.10	2571	285aa	Pp3c27_2420V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.12	1982	285aa	Pp3c27_2420V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.9	1975	285aa	Pp3c27_2420V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.2	1914	285aa	Pp3c27_2420V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.1	1868	285aa	Pp3c27_2420V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IAC5	-
-	Pp3c27_2420V3.6	1805	250aa	Pp3c27_2420V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D5X9	-

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Summary

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