Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_39840

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Location

Chromosome 1: 27,795,857-27,803,112 reverse strand.

About this gene

This gene has 7 transcripts (splice variants), 379 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_39840V3.6	3991	997aa	Pp3c1_39840V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4Y6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_39840V3.7	5617	927aa	Pp3c1_39840V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL2	-
-	Pp3c1_39840V3.4	5298	927aa	Pp3c1_39840V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL2	-
-	Pp3c1_39840V3.3	4727	927aa	Pp3c1_39840V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL2	-
-	Pp3c1_39840V3.2	4286	927aa	Pp3c1_39840V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL2	-
-	Pp3c1_39840V3.1	4210	927aa	Pp3c1_39840V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL2	-
-	Pp3c1_39840V3.5	3982	997aa	Pp3c1_39840V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4Y6	-

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Summary

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