Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_2540

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Location

Chromosome 1: 1,864,712-1,869,956 reverse strand.

About this gene

This gene has 11 transcripts (splice variants), 262 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_2540V3.10	4620	657aa	Pp3c1_2540V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_2540V3.7	3425	657aa	Pp3c1_2540V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.6	2892	657aa	Pp3c1_2540V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.5	2838	657aa	Pp3c1_2540V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.4	2835	657aa	Pp3c1_2540V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.3	2833	657aa	Pp3c1_2540V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.9	2703	502aa	Pp3c1_2540V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BR34	-
-	Pp3c1_2540V3.8	2695	502aa	Pp3c1_2540V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BR34	-
-	Pp3c1_2540V3.2	2522	657aa	Pp3c1_2540V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.1	2506	657aa	Pp3c1_2540V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-
-	Pp3c1_2540V3.11	2451	657aa	Pp3c1_2540V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6M1	-

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Summary

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