Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PHOTA1 Pp3c19_10230

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Location

Chromosome 19: 6,451,359-6,459,631 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 392 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
PHOTA1-206	Pp3c19_10230V3.6	5190	1070aa	Pp3c19_10230V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6BCU1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PHOTA1-203	Pp3c19_10230V3.5	4661	1070aa	Pp3c19_10230V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6BCU1	-
PHOTA1-204	Pp3c19_10230V3.4	4590	1070aa	Pp3c19_10230V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6BCU1	-
PHOTA1-205	Pp3c19_10230V3.3	4566	1070aa	Pp3c19_10230V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6BCU1	-
PHOTA1-201	Pp3c19_10230V3.2	4430	1070aa	Pp3c19_10230V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6BCU1	-
PHOTA1-202	Pp3c19_10230V3.1	4384	1070aa	Pp3c19_10230V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6BCU1	-

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Summary

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