Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: LSM4 Pp3c14_11180

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Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:UniProtKB Gene Name;Acc:A0A2K1JHB2]

Location

Chromosome 14: 7,013,172-7,017,059 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 186 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
LSM4-201	Pp3c14_11180V3.1	1592	159aa	Pp3c14_11180V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JHB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
LSM4-202	Pp3c14_11180V3.3	2021	145aa	Pp3c14_11180V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4AV99	-
LSM4-203	Pp3c14_11180V3.2	1566	159aa	Pp3c14_11180V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JHB2	-

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Summary

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