Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c8_3620

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Location

Chromosome 8: 1,900,802-1,904,188 reverse strand.

About this gene

This gene has 16 transcripts (splice variants), 1 orthologue and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Pp3c8_3620V3.6	2467	387aa	Pp3c8_3620V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c8_3620V3.10	2510	333aa	Pp3c8_3620V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.5	2325	387aa	Pp3c8_3620V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	-
-	Pp3c8_3620V3.9	2151	333aa	Pp3c8_3620V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.8	2148	333aa	Pp3c8_3620V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.4	2134	387aa	Pp3c8_3620V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	-
-	Pp3c8_3620V3.3	2131	387aa	Pp3c8_3620V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	-
-	Pp3c8_3620V3.14	2099	299aa	Pp3c8_3620V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.12	2037	304aa	Pp3c8_3620V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.7	1995	333aa	Pp3c8_3620V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.2	1978	387aa	Pp3c8_3620V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	-
-	Pp3c8_3620V3.13	1943	299aa	Pp3c8_3620V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.11	1881	304aa	Pp3c8_3620V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.1	1850	387aa	Pp3c8_3620V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	-
-	Pp3c8_3620V3.16	1478	333aa	Pp3c8_3620V3.16	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c8_3620V3.15	1461	387aa	Pp3c8_3620V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RY89	-	-

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Summary

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