Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: HDAC2 Os02g0215200

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Gene Synonyms

B1307A11.3-1, HDA710, LOC_Os02g12380, OJ1006_D05.31-1, Os02g0215200, OsJ_05884

Location

Chromosome 2: 6,447,078-6,453,167 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 165 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Os02t0215200-02	1941	509aa	Os02t0215200-02	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6YV04	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Os02t0215200-03	1929	127aa	Os02t0215200-03	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N7KEX5	-	-
-	Os02t0215200-01	1703	498aa	Os02t0215200-01	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9AXF0	-	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data