Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: OPUNC04G11880.1

Description

Sm-like protein LSM1B [Source:Projected from Arabidopsis thaliana (AT3G14080) UniProtKB/Swiss-Prot;Acc:Q8LFL8]

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features and maps to 19 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC04G11880.2	1197	128aa	OPUNC04G11880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KR47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC04G11880.1	1084	128aa	OPUNC04G11880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KR47	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,084 bps, Translation length: 128 residues

Version

OPUNC04G11880.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.