Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: OPUNC04G09700

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Description

histone deacetylase 9 [Source:Projected from Arabidopsis thaliana (AT3G44680) TAIR;Acc:AT3G44680]

Location

Chromosome 4: 17,959,206-17,965,186 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 141 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC04G09700.2	1679	449aa	OPUNC04G09700.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KQ83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC04G09700.3	2039	430aa	OPUNC04G09700.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KQ82	-
-	OPUNC04G09700.1	1954	430aa	OPUNC04G09700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KQ82	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data