Transcript: AT5G42400.1 SDG25-205

Description

SET domain protein 25 [Source:NCBI gene (formerly Entrezgene);Acc:834246]

Location

About this transcript

This transcript has 21 exons, is annotated with 24 domains and features, is associated with 749 variant alleles and maps to 37 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SDG25-201	AT5G42400.2	5364	1388aa	AT5G42400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SDG25-202	AT5G42400.3	5352	1388aa	AT5G42400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-204	AT5G42400.4	5253	1388aa	AT5G42400.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-203	AT5G42400.5	5233	1388aa	AT5G42400.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-206	AT5G42400.6	5227	1388aa	AT5G42400.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-205	AT5G42400.1	5142	1388aa	AT5G42400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-207	AT5G42400.7	5123	1388aa	AT5G42400.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-208	AT5G42400.8	4779	1388aa	AT5G42400.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-

Summary

Statistics

Exons: 21, Coding exons: 18, Transcript length: 5,142 bps, Translation length: 1,388 residues

Version

AT5G42400.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.