Description

MADS-box protein AGL42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIS1]

Location
About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 428 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene AT5G62165 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAT5G62165.61603153aaAT5G62165.6
 
Protein coding
Q0WRE2 NM_001345531.1
NM_001345536.1
NM_001345537.1
NM_001345538.1
NM_001345539.1
NP_001330220.1
NP_001330226.1
NP_001330227.1
NP_001330228.1
NP_001330229.1
NovelAT5G62165.71525153aaAT5G62165.7
 
Protein coding
Q0WRE2 NM_001345531.1
NM_001345536.1
NM_001345537.1
NM_001345538.1
NM_001345539.1
NP_001330220.1
NP_001330226.1
NP_001330227.1
NP_001330228.1
NP_001330229.1
NovelAT5G62165.81513153aaAT5G62165.8
 
Protein coding
Q0WRE2 NM_001345531.1
NM_001345536.1
NM_001345537.1
NM_001345538.1
NM_001345539.1
NP_001330220.1
NP_001330226.1
NP_001330227.1
NP_001330228.1
NP_001330229.1
NovelAT5G62165.91409153aaAT5G62165.9
 
Protein coding
Q0WRE2 NM_001345531.1
NM_001345536.1
NM_001345537.1
NM_001345538.1
NM_001345539.1
NP_001330220.1
NP_001330226.1
NP_001330227.1
NP_001330228.1
NP_001330229.1
NovelAT5G62165.131366153aaAT5G62165.13
 
Protein coding
Q0WRE2 NM_001345531.1
NM_001345536.1
NM_001345537.1
NM_001345538.1
NM_001345539.1
NP_001330220.1
NP_001330226.1
NP_001330227.1
NP_001330228.1
NP_001330229.1
NovelAT5G62165.141335107aaAT5G62165.14
 
Protein coding
A0A1P8BA41 NM_001345532.1
NP_001330218.1
NovelAT5G62165.111175157aaAT5G62165.11
 
Protein coding
A0A1P8BA62 NM_001345529.1
NM_001345530.1
NM_001345535.1
NP_001330221.1
NP_001330224.1
NP_001330225.1
NovelAT5G62165.121163157aaAT5G62165.12
 
Protein coding
A0A1P8BA62 NM_001345529.1
NM_001345530.1
NM_001345535.1
NP_001330221.1
NP_001330224.1
NP_001330225.1
NovelAT5G62165.21142210aaAT5G62165.2
 
Protein coding
Q9FIS1 NM_001037046.2
NM_001203664.2
NM_001345528.1
NM_125610.4
NM_180916.1
NP_001032123.1
NP_001190593.1
NP_001330222.1
NP_568952.1
NP_851247.1
NovelAT5G62165.101100196aaAT5G62165.10
 
Protein coding
-NM_001203664.2
NM_001345528.1
NP_001190593.1
NP_001330222.1
NovelAT5G62165.31099210aaAT5G62165.3
 
Protein coding
Q9FIS1 NM_001037046.2
NM_001203664.2
NM_001345528.1
NM_125610.4
NM_180916.1
NP_001032123.1
NP_001190593.1
NP_001330222.1
NP_568952.1
NP_851247.1
NovelAT5G62165.11091210aaAT5G62165.1
 
Protein coding
Q9FIS1 NM_001037046.2
NM_001203664.2
NM_001345528.1
NM_125610.4
NM_180916.1
NP_001032123.1
NP_001190593.1
NP_001330222.1
NP_568952.1
NP_851247.1
NovelAT5G62165.41057196aaAT5G62165.4
 
Protein coding
-NM_001203664.2
NM_001345528.1
NP_001190593.1
NP_001330222.1
NovelAT5G62165.5950157aaAT5G62165.5
 
Protein coding
F4K6E5 NM_001203665.2
NM_001345533.1
NP_001190594.1
NP_001330219.1
NovelAT5G62165.15949157aaAT5G62165.15
 
Protein coding
F4K6E5 NM_001203665.2
NM_001345533.1
NP_001190594.1
NP_001330219.1
NovelAT5G62165.17919157aaAT5G62165.17
 
Protein coding
A0A1P8BA62 NM_001345529.1
NM_001345530.1
NM_001345535.1
NP_001330221.1
NP_001330224.1
NP_001330225.1
NovelAT5G62165.16872143aaAT5G62165.16
 
Protein coding
A0A1P8BA55 NM_001345534.1
NP_001330223.1
Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,163 bps, Translation length: 157 residues

Version

AT5G62165.12.

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.

Transcript-based displays