Transcript: AT5G58500.1 LSH5-201

Description

LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) [Source:NCBI gene (formerly Entrezgene);Acc:28721277]

Location

About this transcript

This transcript has 1 exon, is annotated with 7 domains and features, is associated with 116 variant alleles and maps to 34 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LSH5-201	AT5G58500.1	1286	182aa	AT5G58500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178U8N9 Q9FGH2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,286 bps, Translation length: 182 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9FGH2

Version

AT5G58500.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.