Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: AT5G54080.2 HGO-202

Description

homogentisate 1,2-dioxygenase [Source:NCBI gene (formerly Entrezgene);Acc:835494]

Location

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features and is associated with 319 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HGO-202	AT5G54080.2	2185	461aa	AT5G54080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ZRA2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HGO-201	AT5G54080.1	1656	461aa	AT5G54080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ZRA2	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,185 bps, Translation length: 461 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ZRA2

Version

AT5G54080.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.