Transcript: AT5G25520.7 AT5G25520-201

Description

SPOC domain / Transcription elongation factor S-II protein [Source:NCBI gene (formerly Entrezgene);Acc:832627]

Location

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 188 variant alleles and maps to 16 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G25520-206	AT5G25520.6	3648	1007aa	AT5G25520.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BD97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G25520-203	AT5G25520.3	4192	782aa	AT5G25520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UHQ5 A0A384LKH0	-	-
AT5G25520-204	AT5G25520.4	4081	735aa	AT5G25520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-
AT5G25520-202	AT5G25520.5	4051	735aa	AT5G25520.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-
AT5G25520-205	AT5G25520.1	3825	735aa	AT5G25520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-
AT5G25520-207	AT5G25520.2	3618	997aa	AT5G25520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JWU1	-	-
AT5G25520-201	AT5G25520.7	2713	735aa	AT5G25520.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,713 bps, Translation length: 735 residues

Version

AT5G25520.7

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.