Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- 3D Protein model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT5G11870.2

Description

Alkaline phytoceramidase (APHC) [Source:UniProtKB/TrEMBL;Acc:F4JZD5]

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 134 variant alleles and maps to 42 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Novel	AT5G11870.1	1343	262aa	AT5G11870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LYI6	NM_121225.4 NP_196748.1
Novel	AT5G11870.2	1323	270aa	AT5G11870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UPH9 F4JZD5	NM_001203363.2 NP_001190292.1

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,323 bps, Translation length: 270 residues

Version

AT5G11870.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.