Transcript: AT3G25690.1 CHUP1-206

Description

Hydroxyproline-rich glycoprotein family protein [Source:NCBI gene (formerly Entrezgene);Acc:822157]

Location

About this transcript

This transcript has 9 exons, is annotated with 25 domains and features, is associated with 291 variant alleles and maps to 35 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CHUP1-202	AT3G25690.5	3442	1006aa	AT3G25690.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LT48	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CHUP1-203	AT3G25690.6	4364	1004aa	AT3G25690.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LI74	-	-
CHUP1-206	AT3G25690.1	3947	1004aa	AT3G25690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LI74	-	-
CHUP1-201	AT3G25690.4	3603	1004aa	AT3G25690.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LI74	-	-
CHUP1-204	AT3G25690.2	3418	1004aa	AT3G25690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LI74	-	-
CHUP1-205	AT3G25690.3	2995	863aa	AT3G25690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JA42	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,947 bps, Translation length: 1,004 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9LI74

Version

AT3G25690.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.