Transcript: AT1G04080.3 PRP39-201

Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839314]

Location

About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 279 variant alleles and maps to 50 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PRP39-201	AT1G04080.3	2963	823aa	AT1G04080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I448	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PRP39-203	AT1G04080.4	2791	768aa	AT1G04080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LP66 Q93ZR3	-	-
PRP39-202	AT1G04080.1	2759	768aa	AT1G04080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LP66 Q93ZR3	-	-
PRP39-205	AT1G04080.2	2368	582aa	AT1G04080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I450	-	-
PRP39-204	AT1G04080.5	2188	549aa	AT1G04080.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ATH2	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,963 bps, Translation length: 823 residues

Version

AT1G04080.3

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.