Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G56530

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Description

tRNA-splicing ligase (DUF239) [Source:NCBI gene (formerly Entrezgene);Acc:835754]

Gene Synonyms

MKN22.4, MKN22_4

Location

Chromosome 5: 22,889,073-22,891,866 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues and 52 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G56530-202	AT5G56530.1	1989	420aa	AT5G56530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9YEL4 Q9LVC1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G56530-201	AT5G56530.2	1873	420aa	AT5G56530.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9YEL4 Q9LVC1	-	-

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Summary

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