Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SDG25 AT5G42400

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Description

SET domain protein 25 [Source:NCBI gene (formerly Entrezgene);Acc:834246]

Gene Synonyms

ARABIDOPSIS TRITHORAX-RELATED7, ATXR7, MDH9.9, MDH9_9, SET domain protein 25

Location

Chromosome 5: 16,953,515-16,961,245 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 160 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SDG25-201	AT5G42400.2	5364	1388aa	AT5G42400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SDG25-202	AT5G42400.3	5352	1388aa	AT5G42400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-204	AT5G42400.4	5253	1388aa	AT5G42400.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-203	AT5G42400.5	5233	1388aa	AT5G42400.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-206	AT5G42400.6	5227	1388aa	AT5G42400.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-205	AT5G42400.1	5142	1388aa	AT5G42400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-207	AT5G42400.7	5123	1388aa	AT5G42400.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-
SDG25-208	AT5G42400.8	4779	1388aa	AT5G42400.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 A0A654G783	-	-

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Summary

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