Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: ATXR7 AT5G42400

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Description

SET domain protein 25 [Source:TAIR;Acc:AT5G42400]

Synonyms

SDG25

Location

Chromosome 5: 16,953,515-16,961,245 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 119 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	AT5G42400.2	5364	1388aa	AT5G42400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.3	5352	1388aa	AT5G42400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.4	5253	1388aa	AT5G42400.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UAR3 A0A178UCL8 A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.5	5233	1388aa	AT5G42400.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.6	5227	1388aa	AT5G42400.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4 F4K1J4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.1	5142	1388aa	AT5G42400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.7	5123	1388aa	AT5G42400.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1
-	AT5G42400.8	4779	1388aa	AT5G42400.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBK4	NM_001344444.1 NM_001344445.1 NM_001344446.1 NM_001344447.1 NM_001344448.1 NM_001344449.1 NM_001344450.1 NM_001344451.1 NP_001318731.1 NP_001330664.1 NP_001330665.1 NP_001330666.1 NP_001330667.1 NP_001330668.1 NP_001330669.1 NP_001330670.1

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Summary

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Gene-based displays