Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G25520

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Description

SPOC domain / Transcription elongation factor S-II protein [Source:NCBI gene (formerly Entrezgene);Acc:832627]

Gene Synonyms

T14C9.60, T14C9_60

Location

Chromosome 5: 8,885,088-8,889,904 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 210 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G25520-206	AT5G25520.6	3648	1007aa	AT5G25520.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BD97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G25520-203	AT5G25520.3	4192	782aa	AT5G25520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UHQ5 A0A384LKH0	-	-
AT5G25520-204	AT5G25520.4	4081	735aa	AT5G25520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-
AT5G25520-202	AT5G25520.5	4051	735aa	AT5G25520.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-
AT5G25520-205	AT5G25520.1	3825	735aa	AT5G25520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-
AT5G25520-207	AT5G25520.2	3618	997aa	AT5G25520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JWU1	-	-
AT5G25520-201	AT5G25520.7	2713	735aa	AT5G25520.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GYX6	-	-

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Summary

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