Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G18540

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Description

E3 ubiquitin-protein ligase [Source:NCBI gene (formerly Entrezgene);Acc:831972]

Gene Synonyms

T28N17.20, T28N17_20

Location

Chromosome 5: 6,153,785-6,156,309 forward strand.

About this gene

This gene has 4 transcripts (splice variants) and 76 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G18540-203	AT5G18540.1	1025	168aa	AT5G18540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178ULJ7 Q6GKY0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G18540-204	AT5G18540.4	991	125aa	AT5G18540.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B9P5	-	-
AT5G18540-202	AT5G18540.3	979	125aa	AT5G18540.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B9P5	-	-
AT5G18540-201	AT5G18540.2	944	166aa	AT5G18540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UK53 F4JY14	-	-

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Summary

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