Transcript: AT5G18540.2 AT5G18540-201

Description

E3 ubiquitin-protein ligase [Source:NCBI gene (formerly Entrezgene);Acc:831972]

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 138 variant alleles and maps to 37 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G18540-203	AT5G18540.1	1025	168aa	AT5G18540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178ULJ7 Q6GKY0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G18540-204	AT5G18540.4	991	125aa	AT5G18540.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B9P5	-	-
AT5G18540-202	AT5G18540.3	979	125aa	AT5G18540.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B9P5	-	-
AT5G18540-201	AT5G18540.2	944	166aa	AT5G18540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UK53 F4JY14	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 944 bps, Translation length: 166 residues

Version

AT5G18540.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.