Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Ensembl Plants is produced in collaboration with Gramene

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Gene: NFYA1 AT5G12840

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Description

Nuclear transcription factor Y subunit A-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV5]

Gene Synonyms

At5g12840, EMB2220, HAP2A, T24H18_10

Location

Chromosome 5: 4,050,691-4,053,669 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 134 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	AT5G12840.3	1580	272aa	AT5G12840.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654G0N9 Q1ECD3 Q9LXV5	NM_001343248.1 NM_121287.4 NM_180480.3 NM_203044.4 NM_203045.2 NP_001318552.1 NP_568282.1 NP_850811.1 NP_974773.1 NP_974774.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AT5G12840.2	1467	271aa	AT5G12840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2FA58 B9DGV8	NM_180480.3 NM_203045.2 NP_850811.1 NP_974774.1	-
-	AT5G12840.1	1445	272aa	AT5G12840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654G0N9 Q1ECD3 Q9LXV5	NM_001343248.1 NM_121287.4 NM_180480.3 NM_203044.4 NM_203045.2 NP_001318552.1 NP_568282.1 NP_850811.1 NP_974773.1 NP_974774.1	-
-	AT5G12840.4	1392	271aa	AT5G12840.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2FA58 B9DGV8	NM_180480.3 NM_203045.2 NP_850811.1 NP_974774.1	-
-	AT5G12840.5	1275	272aa	AT5G12840.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UBN2 A0A178UEI3 A0A178UQU1 A0A5S9Y5T6 A0A654G0N9 Q1ECD3 Q9LXV5	NM_001343248.1 NM_121287.4 NM_180480.3 NM_203044.4 NM_203045.2 NP_001318552.1 NP_568282.1 NP_850811.1 NP_974773.1 NP_974774.1	-

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Summary

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Gene-based displays