Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PPR40 AT3G16890

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Description

pentatricopeptide (PPR) domain protein 40 [Source:NCBI gene (formerly Entrezgene);Acc:820944]

Gene Synonyms

pentatricopeptide (PPR) domain protein 40

Location

Chromosome 3: 5,767,977-5,770,488 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 102 orthologues and 460 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PPR40-201	AT3G16890.1	2460	659aa	AT3G16890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VFN1 Q9LSQ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PPR40-202	AT3G16890.2	2362	530aa	AT3G16890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN42	-	-

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Summary

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