Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SYP52 AT1G79590

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Description

syntaxin of plants 52 [Source:NCBI gene (formerly Entrezgene);Acc:844297]

Gene Synonyms

ATSYP52, F20B17.2, F20B17_2, syntaxin of plants 52

Location

Chromosome 1: 29,946,185-29,948,807 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SYP52-203	AT1G79590.3	1412	264aa	AT1G79590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ARR3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SYP52-202	AT1G79590.1	1492	233aa	AT1G79590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ES17 Q94KK7	-	-
SYP52-201	AT1G79590.2	1387	233aa	AT1G79590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ES17 Q94KK7	-	-

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Summary

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