Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: DEK1 AT1G55350

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Description

Calpain-type cysteine protease family [Source:UniProtKB/TrEMBL;Acc:F4I0A4]

Synonyms

ATDEK1

Location

Chromosome 1: 20,653,740-20,665,110 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 114 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	AT1G55350.1	7610	2151aa	AT1G55350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RVL2	NM_001333706.1 NM_001333707.1 NM_104411.4 NM_180635.1 NM_180636.1 NP_001319240.1 NP_001321273.1 NP_175932.2 NP_850966.1 NP_850967.1
-	AT1G55350.4	7557	2151aa	AT1G55350.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RVL2	NM_001333706.1 NM_001333707.1 NM_104411.4 NM_180635.1 NM_180636.1 NP_001319240.1 NP_001321273.1 NP_175932.2 NP_850966.1 NP_850967.1
-	AT1G55350.6	7536	2151aa	AT1G55350.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RVL2	NM_001333706.1 NM_001333707.1 NM_104411.4 NM_180635.1 NM_180636.1 NP_001319240.1 NP_001321273.1 NP_175932.2 NP_850966.1 NP_850967.1
-	AT1G55350.5	7308	2179aa	AT1G55350.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I0A4	NM_001198309.1 NP_001185238.1
-	AT1G55350.3	7220	2151aa	AT1G55350.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WD40 Q8RVL2	NM_001333706.1 NM_001333707.1 NM_104411.4 NM_180635.1 NM_180636.1 NP_001319240.1 NP_001321273.1 NP_175932.2 NP_850966.1 NP_850967.1
-	AT1G55350.2	7133	2151aa	AT1G55350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RVL2	NM_001333706.1 NM_001333707.1 NM_104411.4 NM_180635.1 NM_180636.1 NP_001319240.1 NP_001321273.1 NP_175932.2 NP_850966.1 NP_850967.1

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Summary

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Gene-based displays