Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G52380

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Description

NUP50 (Nucleoporin 50 kDa) protein [Source:NCBI gene (formerly Entrezgene);Acc:841668]

Gene Synonyms

F19K6.4, F19K6_4

Location

Chromosome 1: 19,508,938-19,511,641 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G52380-202	AT1G52380.3	2438	440aa	AT1G52380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C829	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G52380-204	AT1G52380.4	2229	440aa	AT1G52380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C829	-	-
AT1G52380-201	AT1G52380.2	2022	440aa	AT1G52380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C829	-	-
AT1G52380-203	AT1G52380.1	1858	440aa	AT1G52380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C829	-	-

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Summary

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