Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: LCBK1 AT5G23450

.

Description

long-chain base (LCB) kinase 1 [Source:NCBI gene (formerly Entrezgene);Acc:832411]

Gene Synonyms

ATLCBK1, K19M13.8, K19M13_8, long-chain base (LCB) kinase 1, SPHINGOSINE KINASE

Location

Chromosome 5: 7,904,293-7,909,623 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LCBK1-205	AT5G23450.3	3126	778aa	AT5G23450.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3H501	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
LCBK1-202	AT5G23450.2	3444	763aa	AT5G23450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UBT3 Q9LRB0	-	-
LCBK1-203	AT5G23450.1	3310	763aa	AT5G23450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UBT3 Q9LRB0	-	-
LCBK1-204	AT5G23450.5	2948	763aa	AT5G23450.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UBT3 Q9LRB0	-	-
LCBK1-201	AT5G23450.4	2888	759aa	AT5G23450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BDB5	-	-

.

Summary

.

.