Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G16880

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Description

Target of Myb protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:831551]

Gene Synonyms

F2K13.30, F2K13_30

Location

Chromosome 5: 5,548,914-5,551,509 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 246 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G16880-202	AT5G16880.4	2155	407aa	AT5G16880.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UI99 Q9LFL3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G16880-203	AT5G16880.2	1674	407aa	AT5G16880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UI99 Q9LFL3	-	-
AT5G16880-201	AT5G16880.1	1656	407aa	AT5G16880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UI99 Q9LFL3	-	-
AT5G16880-204	AT5G16880.3	1502	297aa	AT5G16880.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KFJ2	-	-

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Summary

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