Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AGL42 AT5G62165

.

Description

AGAMOUS-like 42 [Source:NCBI gene (formerly Entrezgene);Acc:836337]

Gene Synonyms

AGAMOUS-like 42, FOREVER YOUNG FLOWER, FYF

Location

Chromosome 5: 24,964,646-24,968,607 forward strand.

About this gene

This gene has 17 transcripts (splice variants), 90 orthologues and 100 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AGL42-205	AT5G62165.2	1142	210aa	AT5G62165.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GD96 Q9FIS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AGL42-203	AT5G62165.6	1603	153aa	AT5G62165.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0WRE2	-	-
AGL42-204	AT5G62165.7	1525	153aa	AT5G62165.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0WRE2	-	-
AGL42-206	AT5G62165.8	1513	153aa	AT5G62165.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0WRE2	-	-
AGL42-201	AT5G62165.9	1409	153aa	AT5G62165.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0WRE2	-	-
AGL42-209	AT5G62165.13	1366	153aa	AT5G62165.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0WRE2	-	-
AGL42-213	AT5G62165.14	1335	107aa	AT5G62165.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BA41	-	-
AGL42-208	AT5G62165.11	1175	157aa	AT5G62165.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BA62	-	-
AGL42-207	AT5G62165.12	1163	157aa	AT5G62165.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BA62	-	-
AGL42-202	AT5G62165.10	1100	196aa	AT5G62165.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AGL42-211	AT5G62165.3	1099	210aa	AT5G62165.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GD96 Q9FIS1	-	-
AGL42-214	AT5G62165.1	1091	210aa	AT5G62165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GD96 Q9FIS1	-	-
AGL42-210	AT5G62165.4	1057	196aa	AT5G62165.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AGL42-216	AT5G62165.5	950	157aa	AT5G62165.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K6E5	-	-
AGL42-212	AT5G62165.15	949	157aa	AT5G62165.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K6E5	-	-
AGL42-217	AT5G62165.17	919	157aa	AT5G62165.17	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BA62	-	-
AGL42-215	AT5G62165.16	872	143aa	AT5G62165.16	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BA55	-	-

.

Summary

.

.