Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G80000

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Description

CASC3/Barentsz eIF4AIII binding protein [Source:NCBI gene (formerly Entrezgene);Acc:844340]

Gene Synonyms

F19K16.3, F19K16_3

Location

Chromosome 1: 30,092,807-30,097,323 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G80000-201	AT1G80000.2	2702	605aa	AT1G80000.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WMN8 Q93ZJ9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G80000-202	AT1G80000.1	2620	605aa	AT1G80000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WMN8 Q93ZJ9	-	-
AT1G80000-204	AT1G80000.4	2531	599aa	AT1G80000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AV18	-	-
AT1G80000-203	AT1G80000.3	2421	605aa	AT1G80000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WMN8 Q93ZJ9	-	-

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Summary

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