Transcript: AT1G80000.3 AT1G80000-203

Description

CASC3/Barentsz eIF4AIII binding protein [Source:NCBI gene (formerly Entrezgene);Acc:844340]

Location

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 268 variant alleles and maps to 34 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G80000-201	AT1G80000.2	2702	605aa	AT1G80000.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WMN8 Q93ZJ9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G80000-202	AT1G80000.1	2620	605aa	AT1G80000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WMN8 Q93ZJ9	-	-
AT1G80000-204	AT1G80000.4	2531	599aa	AT1G80000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AV18	-	-
AT1G80000-203	AT1G80000.3	2421	605aa	AT1G80000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WMN8 Q93ZJ9	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 2,421 bps, Translation length: 605 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q93ZJ9

Version

AT1G80000.3

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.