Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PRP39 AT1G04080

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Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839314]

Gene Synonyms

F20D22.14

Location

Chromosome 1: 1,051,312-1,056,827 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 173 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PRP39-201	AT1G04080.3	2963	823aa	AT1G04080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I448	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PRP39-203	AT1G04080.4	2791	768aa	AT1G04080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LP66 Q93ZR3	-	-
PRP39-202	AT1G04080.1	2759	768aa	AT1G04080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LP66 Q93ZR3	-	-
PRP39-205	AT1G04080.2	2368	582aa	AT1G04080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I450	-	-
PRP39-204	AT1G04080.5	2188	549aa	AT1G04080.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ATH2	-	-

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Summary

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