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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb380990_T001

Description

Zm00001e036866

Location

Chromosome 9: 41,987,858-41,993,814 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 772 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene Zm00001eb380990 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb380990_T0042529413aaZm00001eb380990_P004
 
Protein coding
A0A1D6NZ63 -Ensembl Canonical
-Zm00001eb380990_T0022615412aaZm00001eb380990_P002
 
Protein coding
A0A1D6NZ67 A0A1D6NZ73 --
-Zm00001eb380990_T0012603408aaZm00001eb380990_P001
 
Protein coding
K7VG92 --
-Zm00001eb380990_T0032325408aaZm00001eb380990_P003
 
Protein coding
A0A1D6NZ62 A0A1D6NZ64 A0A3L6DB96
K7VG92 		--
-Zm00001eb380990_T0052295413aaZm00001eb380990_P005
 
Protein coding
A0A1D6NZ63 A0A1D6NZ75 A0A1D6NZ76
--
-Zm00001eb380990_T0062261407aaZm00001eb380990_P006
 
Protein coding
B6TCQ2 K7VTP2 --

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,603 bps, Translation length: 408 residues

Version

Zm00001eb380990_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.