EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb369790_T002

Description

Zm00001e028943

Location

Chromosome 8: 178,427,481-178,430,507 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 844 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene Zm00001eb369790 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb369790_T0011824438aaZm00001eb369790_P001
 
Protein coding
A0A3L6DU72 C0PFV3 -Ensembl Canonical
-Zm00001eb369790_T0031913336aaZm00001eb369790_P003
 
Protein coding
C0PMD2 --
-Zm00001eb369790_T0021722404aaZm00001eb369790_P002
 
Protein coding
B4FB12 --
-Zm00001eb369790_T0041614374aaZm00001eb369790_P004
 
Protein coding
---
-Zm00001eb369790_T0051588378aaZm00001eb369790_P005
 
Protein coding
---

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,722 bps, Translation length: 404 residues

Version

Zm00001eb369790_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.