EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb365170_T003

Description

Zm00001e028520

Location

Chromosome 8: 169,539,567-169,541,364 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 147 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene Zm00001eb365170 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb365170_T0012127138aaZm00001eb365170_P001
 
Protein coding
K7V693 Ensembl Canonical
-Zm00001eb365170_T0021154138aaZm00001eb365170_P002
 
Protein coding
A0A1D6FII3 A0A1D6FII5 A0A1D6G6H4
A0A1D6G6I0 A0A1D6GVY6 A0A1D6GW08
A0A1D6LQ92 A0A1D6LQ96 A0A1D6LQB3
A0A3L6D8Y6 A0A3L6E9L6 K7V693
-
-Zm00001eb365170_T003839128aaZm00001eb365170_P003
 
Protein coding
--

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 839 bps, Translation length: 128 residues

Version

Zm00001eb365170_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.