EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb358450_T005

Description

Zm00001e027895

Location

Chromosome 8: 148,580,937-148,590,488 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 524 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene Zm00001eb358450 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb358450_T00239081041aaZm00001eb358450_P002
 
Protein coding
A0A1D6FZK5 A0A1D6FZK7 A0A1D6FZK9
A0A1D6FZL2 A0A1D6FZL4 A0A1D6FZM1
A0A1D6FZM6 A0A1D6FZM7 A0A1D6FZN3
A0A1D6FZP0 A0A3L6D6M8 A0A3L6DPE8
-Ensembl Canonical
-Zm00001eb358450_T0013931769aaZm00001eb358450_P001
 
Protein coding
A0A1D6FZL0 --
-Zm00001eb358450_T004965169aaZm00001eb358450_P004
 
Protein coding
---
-Zm00001eb358450_T005876173aaZm00001eb358450_P005
 
Protein coding
---
-Zm00001eb358450_T003867182aaZm00001eb358450_P003
 
Protein coding
---

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 876 bps, Translation length: 173 residues

Version

Zm00001eb358450_T005

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.