EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb348890_T002

Description

Zm00001e027014

Location

Chromosome 8: 104,332,071-104,335,019 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 639 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene Zm00001eb348890 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb348890_T0042626392aaZm00001eb348890_P004
 
Protein coding
K7VV70 -Ensembl Canonical
-Zm00001eb348890_T0022622359aaZm00001eb348890_P002
 
Protein coding
A0A3L6DLQ4 B6TWP6 --
-Zm00001eb348890_T0052527359aaZm00001eb348890_P005
 
Protein coding
A0A3L6DLQ4 B6TWP6 B6U574
B8A102 		--
-Zm00001eb348890_T0012217359aaZm00001eb348890_P001
 
Protein coding
A0A3L6DLQ4 B6TWP6 --
-Zm00001eb348890_T0031966392aaZm00001eb348890_P003
 
Protein coding
K7VV70 --
-Zm00001eb348890_T0061278359aaZm00001eb348890_P006
 
Protein coding
A0A3L6DLQ4 B6TWP6 --

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 2,622 bps, Translation length: 359 residues

Version

Zm00001eb348890_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.