Transcript: Zm00001eb284760_T002

Description

Zm00001e031343

Location

Chromosome 6: 145,634,662-145,641,409 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 23 domains and features, is associated with 523 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene Zm00001eb284760 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb284760_T002	2461	542aa	Zm00001eb284760_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6M0Q0 A0A1D6M0Q4 A0A1D6M0Q5 A0A1D6M0Q7 A0A1D6M0R0 A0A1D6M0R1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb284760_T001	2739	376aa	Zm00001eb284760_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb284760_T003	2030	542aa	Zm00001eb284760_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,461 bps, Translation length: 542 residues

Version

Zm00001eb284760_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb284760_T002

Summary

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Transcript: Zm00001eb284760_T002

Summary

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