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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb243400_T005

Description

Zm00001e014785

Location

Chromosome 5: 174,743,940-174,748,569 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 641 variant alleles and maps to 89 oligo probes.

Gene

This transcript is a product of gene Zm00001eb243400 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb243400_T0031823459aaZm00001eb243400_P003
 
Protein coding
-Ensembl Canonical
-Zm00001eb243400_T0021931376aaZm00001eb243400_P002
 
Protein coding
--
-Zm00001eb243400_T0041720350aaZm00001eb243400_P004
 
Protein coding
A0A317Y6P5 A0A3L6FVK0 -
-Zm00001eb243400_T0051671459aaZm00001eb243400_P005
 
Protein coding
A0A096TT32 A0A1D6HA80 A0A1D6HA82
A0A1D6HA83 A0A3L6ENK1 C0PH87
-
-Zm00001eb243400_T0011664336aaZm00001eb243400_P001
 
Protein coding
A0A1D6HA79 A0A1D6HA81 B6T021
-
-Zm00001eb243400_T0061512336aaZm00001eb243400_P006
 
Protein coding
--

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,671 bps, Translation length: 459 residues

Version

Zm00001eb243400_T005

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.