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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb225760_T003

Description

Zm00001e013077

Location

Chromosome 5: 51,706,829-51,714,534 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 558 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene Zm00001eb225760 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb225760_T0012784737aaZm00001eb225760_P001
 
Protein coding
A0A1D6GTZ9 A0A1D6GU00 A0A1D6GU06
A0A3L6EUN2 C0PFX5 		-Ensembl Canonical
-Zm00001eb225760_T0022602713aaZm00001eb225760_P002
 
Protein coding
A0A1D6GU05 --
-Zm00001eb225760_T0032581708aaZm00001eb225760_P003
 
Protein coding
A0A1D6GU07 --
-Zm00001eb225760_T0042204684aaZm00001eb225760_P004
 
Protein coding
A0A1D6EPF8 A0A1D6EPG0 A0A1D6EPG1
A0A1D6FD55 A0A1D6FD56 		--
-Zm00001eb225760_T0051972653aaZm00001eb225760_P005
 
Protein coding
A0A1D6MW14 A0A3L6EWK2 --

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,581 bps, Translation length: 708 residues

Version

Zm00001eb225760_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.