EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
Search »
Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: Zm00001eb194670_T001

Description

Zm00001e023912

Location

Chromosome 4: 187,498,227-187,506,774 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 20 domains and features, is associated with 413 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene Zm00001eb194670 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb194670_T0012014563aaZm00001eb194670_P001
 
Protein coding
A0A1D6FIS1 A0A1D6HJZ7 A0A1D6QEP8
Ensembl Canonical
-Zm00001eb194670_T0032587537aaZm00001eb194670_P003
 
Protein coding
A0A1D6QEP7 -
-Zm00001eb194670_T0022239561aaZm00001eb194670_P002
 
Protein coding
A0A1D6QEP6 A0A1D6QEP9 A0A1D6QEQ0
A0A3L6F1H6 		-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,014 bps, Translation length: 563 residues

Version

Zm00001eb194670_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.