EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e022330

Location
About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 525 variant alleles and maps to 67 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb178540_T0032039295aaZm00001eb178540_P003
 
Protein coding
B4FK60 -Ensembl Canonical
-Zm00001eb178540_T0081973295aaZm00001eb178540_P008
 
Protein coding
B4FK60 B6T623 --
-Zm00001eb178540_T0071820244aaZm00001eb178540_P007
 
Protein coding
A0A1D6Q0L8 A0A3L6F7D4 A0A3L6F7V8
--
-Zm00001eb178540_T0061495295aaZm00001eb178540_P006
 
Protein coding
B4FK60 --
-Zm00001eb178540_T0041457295aaZm00001eb178540_P004
 
Protein coding
B4FK60 --
-Zm00001eb178540_T0021442295aaZm00001eb178540_P002
 
Protein coding
B4FK60 --
-Zm00001eb178540_T0011358267aaZm00001eb178540_P001
 
Protein coding
---
-Zm00001eb178540_T0051290295aaZm00001eb178540_P005
 
Protein coding
B4FK60 --
Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,442 bps, Translation length: 295 residues

Version

Zm00001eb178540_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.