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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb174000_T004

Description

Zm00001e021861

Location

Chromosome 4: 40,791,550-40,793,415 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 403 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene Zm00001eb174000 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb174000_T0031396271aaZm00001eb174000_P003
 
Protein coding
--Ensembl Canonical
-Zm00001eb174000_T0041502234aaZm00001eb174000_P004
 
Protein coding
C4J9J0 --
-Zm00001eb174000_T0011432257aaZm00001eb174000_P001
 
Protein coding
A0A1D6PX18 A0A3L6F1V8 --
-Zm00001eb174000_T0021385205aaZm00001eb174000_P002
 
Protein coding
A0A1D6PX21 --
-Zm00001eb174000_T0051306241aaZm00001eb174000_P005
 
Protein coding
A0A1D6PX19 --
-Zm00001eb174000_T0061295175aaZm00001eb174000_P006
 
Protein coding
---
-Zm00001eb174000_T0071269227aaZm00001eb174000_P007
 
Protein coding
B6T819 B6TX23 C4J2F4
--

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,502 bps, Translation length: 234 residues

Version

Zm00001eb174000_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.